Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | LK406_08445 | Not Available | Negative | 2056915 - 2057598 | 25836.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | LK406_08450 | Q89ZK5 | Positive | 2057758 - 2058780 | 37883.8 |
| thioredoxin family protein | LK406_08455 | Q9KJZ3 | Positive | 2058858 - 2059277 | 15760.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | LK406_08460 | A6GWQ2 | Negative | 2059294 - 2059917 | 23506.6 |
| rna polymerase sigma factor | LK406_08465 | Q45585 | Negative | 2059922 - 2060485 | 22090.1 |
| glycosyltransferase | LK406_08470 | Not Available | Negative | 2060476 - 2061630 | 44553.4 |
| trna guanosine(34) transglycosylase tgt | LK406_08475 | B0K0M1 | Positive | 2061690 - 2062820 | 42015.4 |
| lptf/lptg family permease | LK406_08480 | Not Available | Positive | 2062824 - 2063927 | 42659.1 |
| pasta domain-containing protein | LK406_08485 | Q8R9T6 | Positive | 2063938 - 2064894 | 35029.1 |
| rlua family pseudouridine synthase | LK406_08490 | O50310 | Positive | 2064894 - 2065976 | 40963.7 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
