Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium/solute symporter | LK406_08395 | Q5E733 | Negative | 2040497 - 2042953 | 87796.2 |
| fcd domain-containing protein | LK406_08400 | O07007 | Negative | 2043126 - 2043851 | 27907.1 |
| dihydrodipicolinate synthase family protein | LK406_08405 | A5FZS7 | Positive | 2044133 - 2045071 | 34829.7 |
| glycoside hydrolase | LK406_08410 | P31206 | Positive | 2045079 - 2046242 | 43085.8 |
| glycoside hydrolase | LK406_08415 | O35657 | Positive | 2046279 - 2047496 | 44310.4 |
| hypothetical protein | LK406_08420 | Not Available | Positive | 2047577 - 2048908 | 48486.3 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_08425 | T2KPM5 | Negative | 2049384 - 2050880 | 55831.6 |
| tonb-dependent receptor | LK406_08430 | T2KPJ3 | Negative | 2050912 - 2054073 | 116040.0 |
| uracil phosphoribosyltransferase | LK406_08435 | B2RIV3 | Negative | 2054877 - 2055533 | 24161.1 |
| gtpase hflx | LK406_08440 | A6H294 | Negative | 2055556 - 2056791 | 46992.2 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
