Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | LK406_08245 | A6LIB3 | Positive | 1995941 - 1996807 | 31710.1 |
| hypothetical protein | LK406_08250 | Not Available | Positive | 1996827 - 1997297 | 18049.2 |
| s41 family peptidase | LK406_08255 | Q44879 | Positive | 1997290 - 1998951 | 61509.2 |
| hamp domain-containing histidine kinase | LK406_08260 | O31661 | Positive | 1998961 - 2000136 | 44421.7 |
| duf4271 domain-containing protein | LK406_08265 | Not Available | Positive | 2000136 - 2001119 | 34871.8 |
| uroporphyrinogen-iii synthase | LK406_08270 | Not Available | Positive | 2001153 - 2002016 | 32182.3 |
| ribonuclease p protein component | LK406_08275 | Q8KGG4 | Positive | 2002040 - 2002408 | 14203.3 |
| membrane protein insertion efficiency factor yidd | LK406_08280 | Q8A2S7 | Positive | 2002365 - 2002625 | 9850.14 |
| cation diffusion facilitator family transporter | LK406_08285 | A7Z1S6 | Negative | 2002915 - 2003808 | 31887.9 |
| helix-turn-helix transcriptional regulator | LK406_08290 | Q1M7A0 | Negative | 2003805 - 2004737 | 34693.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
