Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | LK406_08195 | T2KMI3 | Positive | 1982081 - 1985404 | 124081.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_08200 | T2KPM5 | Positive | 1985418 - 1986884 | 55104.7 |
| duf4843 domain-containing protein | LK406_08205 | Not Available | Positive | 1986898 - 1987803 | 34621.7 |
| hypothetical protein | LK406_08210 | Not Available | Positive | 1987819 - 1989324 | 56397.1 |
| gfo/idh/moca family oxidoreductase | LK406_08215 | Q5LGZ0 | Negative | 1989385 - 1990782 | 52113.2 |
| apolipoprotein n-acyltransferase | LK406_08220 | Q8KCC4 | Positive | 1990878 - 1992467 | 59091.7 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | LK406_08225 | D4GW05 | Positive | 1992480 - 1993769 | 47324.6 |
| duf3467 domain-containing protein | LK406_08230 | Not Available | Negative | 1993827 - 1994132 | 11113.4 |
| lyse family transporter | LK406_08235 | P75693 | Positive | 1994494 - 1995171 | 24803.1 |
| (d)cmp kinase | LK406_08240 | Q5L9K4 | Positive | 1995158 - 1995859 | 26118.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
