Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | LK406_08145 | Q5L9P3 | Positive | 1969757 - 1971094 | 49304.4 |
| thymidine kinase | LK406_08150 | Q8A5G4 | Positive | 1971115 - 1971690 | 21367.7 |
| tetratricopeptide repeat protein | LK406_08155 | Not Available | Negative | 1971813 - 1972505 | 26502.9 |
| carbon starvation protein a | LK406_08160 | O86233 | Negative | 1972486 - 1973958 | 53236.6 |
| Trna-thr | Not Available | Not Available | Positive | 1974087 - 1974158 | Not Available |
| hypothetical protein | LK406_08170 | Not Available | Positive | 1974750 - 1975115 | 12937.8 |
| hypothetical protein | LK406_08175 | Not Available | Positive | 1975163 - 1975663 | 17463.5 |
| two-component sensor histidine kinase | LK406_08180 | Q54YZ9 | Negative | 1975784 - 1977733 | 72867.6 |
| endonuclease/exonuclease/phosphatase family protein | LK406_08185 | Not Available | Negative | 1977926 - 1978975 | 39246.4 |
| zinc-dependent metalloprotease | LK406_08190 | Not Available | Positive | 1979356 - 1982028 | 100118.0 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
