Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | LK406_08045 | Q7MVT7 | Negative | 1946758 - 1948239 | 54111.6 |
| radical sam-associated putative lipoprotein | LK406_08050 | Not Available | Positive | 1948328 - 1948741 | 14855.2 |
| atp-dependent dna helicase recg | LK406_08055 | Q55681 | Positive | 1948901 - 1951012 | 78750.6 |
| duf3108 domain-containing protein | LK406_08060 | Not Available | Positive | 1951088 - 1951885 | 30944.0 |
| hypothetical protein | LK406_08065 | Not Available | Positive | 1951937 - 1952872 | 35425.2 |
| sgnh/gdsl hydrolase family protein | LK406_08070 | Not Available | Negative | 1952942 - 1954015 | 40030.9 |
| rok family protein | LK406_08075 | P0A4E1 | Negative | 1954104 - 1955108 | 36057.2 |
| polyprenyl synthetase family protein | LK406_08080 | Q8PW34 | Positive | 1955226 - 1956197 | 35715.4 |
| hypothetical protein | LK406_08085 | Not Available | Positive | 1956201 - 1956986 | 29532.8 |
| u32 family peptidase | LK406_08090 | P59916 | Positive | 1956992 - 1958242 | 45179.1 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
