Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3078 domain-containing protein | LK406_07995 | Not Available | Negative | 1934249 - 1935415 | 44492.7 |
| deoxyribonuclease iv | LK406_08000 | A8AE66 | Positive | 1935511 - 1936359 | 31354.3 |
| aspartate aminotransferase family protein | LK406_08005 | Q8TUZ5 | Negative | 1936389 - 1937588 | 43385.7 |
| rna methyltransferase | LK406_08010 | O51081 | Negative | 1937581 - 1938291 | 25970.0 |
| ribosome small subunit-dependent gtpase a | LK406_08015 | P59946 | Negative | 1938272 - 1939189 | 33642.2 |
| cvpa family protein | LK406_08020 | Not Available | Negative | 1939179 - 1939697 | 18351.5 |
| helix-turn-helix transcriptional regulator | LK406_08025 | C1CYP4 | Negative | 1939817 - 1940029 | 8325.15 |
| hypothetical protein | LK406_08030 | Not Available | Positive | 1940188 - 1943652 | 124626.0 |
| beta-galactosidase | LK406_08035 | T2KPJ7 | Positive | 1944023 - 1946056 | 75991.8 |
| wbqc family protein | LK406_08040 | P9WLW4 | Negative | 1945977 - 1946582 | 23093.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
