Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad:protein fmn transferase | LK406_07945 | P44550 | Negative | 1924107 - 1925117 | 36237.3 |
| 30s ribosomal protein s15 | LK406_07950 | A6KYS7 | Positive | 1925309 - 1925581 | 10526.7 |
| polyribonucleotide nucleotidyltransferase | LK406_07955 | Q8A4N6 | Positive | 1925674 - 1927917 | 82695.5 |
| hypothetical protein | LK406_07960 | Not Available | Positive | 1928125 - 1929846 | 61786.6 |
| deoxyribose-phosphate aldolase | LK406_07965 | Q91YP3 | Positive | 1930021 - 1930902 | 32009.2 |
| 4fe-4s binding protein | LK406_07970 | Q58132 | Positive | 1931017 - 1931424 | 15234.9 |
| hypothetical protein | LK406_07975 | Not Available | Positive | 1931421 - 1931744 | 12458.2 |
| sigma-70 family rna polymerase sigma factor | LK406_07980 | H8EXN1 | Positive | 1931725 - 1932279 | 21369.4 |
| hypothetical protein | LK406_07985 | Not Available | Negative | 1932350 - 1932622 | 9601.76 |
| s41 family peptidase | LK406_07990 | Q44879 | Negative | 1932615 - 1934249 | 59960.6 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
