Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 26 protein | LK406_07845 | P49424 | Negative | 1895310 - 1896431 | 41812.2 |
| glycoside hydrolase family 26 protein | LK406_07850 | P49424 | Negative | 1896458 - 1897564 | 41671.8 |
| arac family transcriptional regulator | LK406_07855 | Q65Q30 | Negative | 1897596 - 1898489 | 34157.8 |
| age family epimerase/isomerase | LK406_07860 | Q5LH66 | Negative | 1898509 - 1899714 | 45449.6 |
| mfs transporter | LK406_07865 | P75683 | Negative | 1899714 - 1901156 | 52975.1 |
| glycosidase | LK406_07870 | Q5LH68 | Negative | 1901153 - 1902343 | 44378.4 |
| glycoside hydrolase family 97 protein | LK406_07875 | Q8A6L0 | Negative | 1902370 - 1904379 | 74832.8 |
| suse domain-containing protein | LK406_07880 | Not Available | Positive | 1904777 - 1906693 | 70587.9 |
| duf3575 domain-containing protein | LK406_07885 | Not Available | Positive | 1906906 - 1907544 | 24547.7 |
| phosphoenolpyruvate carboxykinase (atp) | LK406_07890 | Q7MU78 | Negative | 1907799 - 1909406 | 59742.7 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
