Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | LK406_07745 | Q2SYI1 | Negative | 1872178 - 1873062 | 32612.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | LK406_07750 | P37780 | Negative | 1873059 - 1873634 | 21755.7 |
| glucose-1-phosphate thymidylyltransferase rfba | LK406_07755 | P95778 | Negative | 1873650 - 1874552 | 32993.6 |
| chain-length determining protein | LK406_07760 | Not Available | Negative | 1874560 - 1875678 | 41435.5 |
| slbb domain-containing protein | LK406_07765 | P42213 | Negative | 1875690 - 1878026 | 85468.7 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | LK406_07770 | O34753 | Negative | 1878155 - 1879297 | 42007.2 |
| upxy family transcription antiterminator | LK406_07775 | Not Available | Negative | 1879580 - 1880125 | 20571.2 |
| hypothetical protein | LK406_07780 | Not Available | Negative | 1880535 - 1880843 | 11052.8 |
| Trna-gly | Not Available | Not Available | Positive | 1880918 - 1880990 | Not Available |
| pyridoxal phosphate-dependent aminotransferase family protein | LK406_07790 | A7BFV6 | Negative | 1881171 - 1882442 | 46847.1 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
