Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wg repeat-containing protein | LK406_07595 | Not Available | Negative | 1830811 - 1831659 | 31550.6 |
| fecr domain-containing protein | LK406_07600 | Not Available | Negative | 1831787 - 1832968 | 43413.5 |
| rna polymerase sigma-70 factor | LK406_07605 | Q06198 | Negative | 1833005 - 1833526 | 20439.9 |
| lyttr family dna-binding domain-containing protein | LK406_07610 | Q9KL96 | Negative | 1833631 - 1834350 | 27562.5 |
| histidine kinase | LK406_07615 | Q8EQQ2 | Negative | 1834347 - 1835396 | 39833.4 |
| abc transporter permease | LK406_07620 | A0LM36 | Negative | 1835421 - 1836641 | 44186.8 |
| abc transporter atp-binding protein | LK406_07625 | Q9WYI7 | Negative | 1836645 - 1837385 | 27262.7 |
| efflux rnd transporter periplasmic adaptor subunit | LK406_07630 | P58411 | Negative | 1837388 - 1838572 | 42367.1 |
| tolc family protein | LK406_07635 | Q8G0Y6 | Negative | 1838592 - 1839890 | 47550.2 |
| helix-turn-helix domain-containing protein | LK406_07640 | T2KMF4 | Negative | 1839999 - 1843952 | 148612.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
