Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | LK406_07445 | P37478 | Positive | 1776005 - 1776685 | 25524.0 |
| hamp domain-containing histidine kinase | LK406_07450 | P23545 | Positive | 1776663 - 1778111 | 54146.0 |
| inorganic phosphate transporter | LK406_07455 | Q5JHX4 | Positive | 1778209 - 1780434 | 81571.7 |
| duf2721 domain-containing protein | LK406_07460 | Not Available | Negative | 1780704 - 1781099 | 14745.6 |
| formate c-acetyltransferase | LK406_07465 | Q2FK44 | Positive | 1781416 - 1783644 | 83845.0 |
| pyruvate formate lyase-activating protein | LK406_07470 | P43751 | Positive | 1783737 - 1784462 | 26863.2 |
| endonuclease/exonuclease/phosphatase family protein | LK406_07475 | Q5UQW5 | Negative | 1784538 - 1785467 | 34593.9 |
| duf5689 domain-containing protein | LK406_07480 | Not Available | Negative | 1785491 - 1788859 | 119625.0 |
| tonb-dependent receptor | LK406_07485 | T2KPJ3 | Positive | 1789104 - 1792226 | 116054.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_07490 | T2KN63 | Positive | 1792252 - 1794138 | 71847.9 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
