Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| batd family protein | LK406_07395 | Not Available | Negative | 1765300 - 1767156 | 68282.3 |
| fumarate hydratase | LK406_07400 | P14407 | Negative | 1767231 - 1768844 | 59288.0 |
| class ii fructose-1,6-bisphosphate aldolase | LK406_07405 | O83668 | Positive | 1769027 - 1770028 | 36151.4 |
| hypothetical protein | LK406_07410 | Not Available | Negative | 1770171 - 1770620 | 17060.3 |
| alpha/beta hydrolase | LK406_07415 | P54567 | Negative | 1770695 - 1771651 | 36019.6 |
| nad-dependent epimerase/dehydratase family protein | LK406_07420 | Q4L3L8 | Negative | 1771655 - 1772605 | 34906.9 |
| Trna-thr | Not Available | Not Available | Positive | 1772720 - 1772791 | Not Available |
| lipopolysaccharide kinase inaa family protein | LK406_07430 | Not Available | Positive | 1772941 - 1773696 | 29390.3 |
| prephenate dehydratase | LK406_07435 | D3U715 | Positive | 1773939 - 1774784 | 30842.0 |
| bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase type ii | LK406_07440 | Q9WYH8 | Positive | 1774816 - 1775883 | 39792.3 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
