Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | LK406_07345 | Not Available | Negative | 1755472 - 1756155 | 24704.5 |
| dna replication and repair protein recf | LK406_07350 | A6L3K9 | Positive | 1756262 - 1757386 | 41902.2 |
| duf721 domain-containing protein | LK406_07355 | Not Available | Positive | 1757383 - 1757673 | 11352.9 |
| ompa family protein | LK406_07360 | Q9S3R8 | Negative | 1757726 - 1758928 | 43599.3 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | LK406_07365 | P9WH76 | Negative | 1759102 - 1761654 | 95529.7 |
| rida family protein | LK406_07370 | Q10121 | Negative | 1761848 - 1762222 | 13055.8 |
| meta domain-containing protein | LK406_07375 | Not Available | Positive | 1762299 - 1762727 | 15429.1 |
| malate dehydrogenase | LK406_07380 | Q9HJL5 | Negative | 1762801 - 1763799 | 36132.7 |
| recombination mediator recr | LK406_07385 | Q8A8T6 | Negative | 1763873 - 1764475 | 22384.2 |
| tetratricopeptide repeat protein | LK406_07390 | Not Available | Negative | 1764476 - 1765294 | 30062.1 |
Pathways
1348 pathways
Health Effects
No health effects information available for this bacterium.
