Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_07295 | Not Available | Negative | 1743629 - 1744510 | 33973.7 |
| glycosyltransferase family 2 protein | LK406_07300 | P11290 | Positive | 1744576 - 1745505 | 34179.1 |
| esterase | LK406_07305 | B8YG19 | Positive | 1745517 - 1746374 | 31648.6 |
| atp-dependent chaperone clpb | LK406_07310 | Q89YY3 | Negative | 1746427 - 1749024 | 96905.0 |
| hypothetical protein | LK406_07315 | Not Available | Negative | 1749231 - 1749647 | 15710.8 |
| dna polymerase iii subunit gamma/tau | LK406_07320 | P09122 | Positive | 1749813 - 1751720 | 69146.1 |
| tyrosine--trna ligase | LK406_07325 | Q5LJ19 | Positive | 1751824 - 1753128 | 48878.0 |
| dihydroneopterin aldolase | LK406_07330 | P0C0G5 | Positive | 1753130 - 1753483 | 13357.4 |
| sodium-dependent transporter | LK406_07335 | O34383 | Positive | 1753541 - 1754890 | 48781.3 |
| 6,7-dimethyl-8-ribityllumazine synthase | LK406_07340 | A6L8H3 | Negative | 1754926 - 1755456 | 19282.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
