Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | LK406_07095 | B7IFN3 | Negative | 1701266 - 1702489 | 46461.2 |
| Trna-pro | Not Available | Not Available | Positive | 1702630 - 1702704 | Not Available |
| abc transporter substrate-binding protein | LK406_07105 | Q58288 | Positive | 1702810 - 1703949 | 41849.8 |
| iron abc transporter permease | LK406_07110 | Q56992 | Positive | 1703953 - 1704954 | 34518.2 |
| abc transporter atp-binding protein | LK406_07115 | Q58283 | Positive | 1704957 - 1705715 | 27539.3 |
| Trna-glu | Not Available | Not Available | Positive | 1705864 - 1705935 | Not Available |
| 30s ribosomal protein s20 | LK406_07125 | A6LHT8 | Positive | 1706079 - 1706330 | 9214.42 |
| tryptophan synthase subunit alpha | LK406_07130 | Q5LBZ2 | Negative | 1706398 - 1707171 | 28436.2 |
| phosphoribosylanthranilate isomerase | LK406_07135 | A6L9J9 | Negative | 1707168 - 1707791 | 22590.0 |
| superoxide dismutase | LK406_07140 | Q8AAD6 | Negative | 1707788 - 1708351 | 20424.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
