Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | LK406_06995 | Not Available | Negative | 1677844 - 1678821 | 37423.8 |
| rna polymerase sigma-70 factor | LK406_07000 | Q45585 | Negative | 1678906 - 1679490 | 22229.0 |
| site-specific integrase | LK406_07005 | Q5L6G3 | Positive | 1680425 - 1681699 | 49048.0 |
| type iv toxin-antitoxin system abiei family antitoxin | LK406_07010 | Not Available | Positive | 1681740 - 1682507 | 29050.4 |
| nucleotidyl transferase abieii/abigii toxin family protein | LK406_07015 | Not Available | Positive | 1682500 - 1683408 | 34752.9 |
| helix-turn-helix domain-containing protein | LK406_07020 | Not Available | Positive | 1684001 - 1684339 | 13083.8 |
| duf6291 domain-containing protein | LK406_07025 | Not Available | Positive | 1684342 - 1684713 | 14789.7 |
| prict-2 domain-containing protein | LK406_07030 | Not Available | Positive | 1684739 - 1685683 | 36424.0 |
| hypothetical protein | LK406_07035 | Not Available | Positive | 1686456 - 1687766 | 48612.8 |
| hypothetical protein | LK406_07040 | Not Available | Positive | 1687776 - 1688867 | 42160.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
