Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-adenosylmethionine:trna ribosyltransferase-isomerase | LK406_06945 | Q7NZD4 | Negative | 1661621 - 1662820 | 45271.9 |
| l-aspartate oxidase | LK406_06950 | Q9KPA4 | Positive | 1662902 - 1664458 | 57849.2 |
| peptide chain release factor 3 | LK406_06955 | Q3A709 | Positive | 1664462 - 1666045 | 59398.9 |
| pirin family protein | LK406_06960 | P46852 | Negative | 1666103 - 1666819 | 26315.1 |
| kama family protein | LK406_06965 | Q58051 | Negative | 1666883 - 1668979 | 80248.5 |
| fibrobacter succinogenes major paralogous domain-containing protein | LK406_06970 | Not Available | Negative | 1669274 - 1670749 | 52614.6 |
| sugar phosphate isomerase/epimerase | LK406_06975 | P55451 | Negative | 1670764 - 1671666 | 32872.2 |
| duf6528 family protein | LK406_06980 | Not Available | Negative | 1671674 - 1672678 | 37241.8 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_06985 | T2KNB8 | Negative | 1672706 - 1674298 | 59713.4 |
| tonb-dependent receptor | LK406_06990 | T2KPJ3 | Negative | 1674316 - 1677702 | 125641.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
