Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimb/mfa2 family fimbrial subunit | LK406_06895 | Not Available | Negative | 1650118 - 1651017 | 32471.5 |
| hypothetical protein | LK406_06900 | Not Available | Negative | 1651106 - 1652248 | 40645.6 |
| duf3868 domain-containing protein | LK406_06905 | Q9S3R9 | Negative | 1652314 - 1653807 | 56117.0 |
| duf3575 domain-containing protein | LK406_06910 | Not Available | Negative | 1653821 - 1654396 | 21665.9 |
| arac family transcriptional regulator | LK406_06915 | Not Available | Positive | 1654697 - 1655599 | 34683.7 |
| site-specific integrase | LK406_06920 | Not Available | Negative | 1655829 - 1657199 | 53261.3 |
| phosphopyruvate hydratase | LK406_06925 | Q5LG64 | Negative | 1657457 - 1658758 | 46486.3 |
| cation:proton antiporter | LK406_06930 | Not Available | Positive | 1658959 - 1660143 | 43069.9 |
| port family protein | LK406_06935 | Not Available | Positive | 1660156 - 1660809 | 24262.7 |
| port family protein | LK406_06940 | Not Available | Positive | 1660945 - 1661553 | 21863.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
