Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | LK406_06845 | P0AD15 | Positive | 1633045 - 1634073 | 39957.5 |
| lyttr family dna-binding domain-containing protein | LK406_06850 | P94514 | Positive | 1634070 - 1634777 | 26731.3 |
| multidrug effflux mfs transporter | LK406_06855 | P96709 | Positive | 1634918 - 1636087 | 41758.5 |
| susc/raga family tonb-linked outer membrane protein | LK406_06860 | T2KM18 | Positive | 1636527 - 1639754 | 118995.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | LK406_06865 | Not Available | Positive | 1639780 - 1641177 | 51966.8 |
| hypothetical protein | LK406_06870 | Not Available | Positive | 1641213 - 1641842 | 22536.1 |
| duf5106 domain-containing protein | LK406_06875 | Not Available | Negative | 1642095 - 1643084 | 36023.0 |
| hypothetical protein | LK406_06880 | B2RH59 | Negative | 1643093 - 1646209 | 114010.0 |
| hypothetical protein | LK406_06885 | B2RH58 | Negative | 1646234 - 1648459 | 82691.4 |
| fimbrial protein | LK406_06890 | Not Available | Negative | 1648504 - 1650105 | 58139.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
