Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_06695 | Not Available | Negative | 1601073 - 1601408 | 12396.0 |
| transcription elongation factor grea | LK406_06700 | A5FJJ8 | Negative | 1601545 - 1602021 | 17480.1 |
| cardiolipin synthase | LK406_06705 | Q9K8Z4 | Positive | 1602137 - 1603501 | 51136.4 |
| port family protein | LK406_06710 | Not Available | Positive | 1603526 - 1604137 | 22659.4 |
| outer membrane protein assembly factor bamd | LK406_06715 | Q9A6U9 | Positive | 1604301 - 1605122 | 31710.6 |
| dna-directed rna polymerase subunit omega | LK406_06720 | Not Available | Positive | 1605125 - 1605457 | 12819.2 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | LK406_06725 | A0A2I9 | Positive | 1605471 - 1606694 | 43236.3 |
| dna repair protein recn | LK406_06730 | A5F379 | Positive | 1606755 - 1608398 | 59827.3 |
| phosphoglycerate mutase family protein | LK406_06735 | Not Available | Positive | 1608478 - 1609065 | 22387.6 |
| dmt family transporter | LK406_06740 | O32256 | Negative | 1609108 - 1610022 | 33456.8 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
