Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_06645 | Not Available | Negative | 1586955 - 1589885 | 110837.0 |
| translation initiation factor | LK406_06650 | O26118 | Negative | 1589887 - 1590234 | 12846.4 |
| duf4435 domain-containing protein | LK406_06655 | Not Available | Positive | 1590404 - 1591501 | 43118.2 |
| aspartate kinase | LK406_06660 | P08660 | Negative | 1591518 - 1592777 | 47143.6 |
| prolyl oligopeptidase family serine peptidase | LK406_06665 | Q06903 | Negative | 1592978 - 1595113 | 79056.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | LK406_06670 | C5CLT4 | Positive | 1595399 - 1596226 | 29997.2 |
| biotin--[acetyl-coa-carboxylase] ligase | LK406_06675 | E0U174 | Positive | 1596229 - 1596951 | 27139.1 |
| glycine cleavage system protein gcvh | LK406_06680 | Q5L7W4 | Positive | 1597033 - 1597410 | 13353.6 |
| malate dehydrogenase | LK406_06685 | A6L903 | Positive | 1597625 - 1598566 | 33034.7 |
| tonb-dependent receptor | LK406_06690 | P17315 | Negative | 1598697 - 1601006 | 84792.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
