Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit d | LK406_06595 | A6L169 | Negative | 1575995 - 1577542 | 58705.4 |
| nadh-quinone oxidoreductase subunit b | LK406_06600 | A6L170 | Negative | 1577607 - 1578266 | 24829.1 |
| nadh-quinone oxidoreductase subunit a | LK406_06605 | A6L171 | Negative | 1578257 - 1578607 | 13107.5 |
| hypothetical protein | LK406_06610 | Not Available | Negative | 1578716 - 1579075 | 12837.6 |
| superoxide dismutase | LK406_06615 | P19665 | Negative | 1579252 - 1579860 | 22555.3 |
| sialate o-acetylesterase | LK406_06620 | Q5RFU0 | Positive | 1580067 - 1581494 | 52169.4 |
| site-specific integrase | LK406_06625 | Not Available | Negative | 1581536 - 1582744 | 45994.7 |
| hypothetical protein | LK406_06630 | Not Available | Negative | 1582864 - 1583343 | 17762.1 |
| aspartate-semialdehyde dehydrogenase | LK406_06635 | O67716 | Negative | 1583392 - 1584384 | 36385.8 |
| penicillin-binding protein | LK406_06640 | O87579 | Negative | 1584516 - 1586918 | 90043.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
