Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i glyceraldehyde-3-phosphate dehydrogenase | LK406_06445 | P52694 | Negative | 1545582 - 1546598 | 36275.6 |
| atp-binding cassette domain-containing protein | LK406_06450 | Q3A9G5 | Negative | 1546741 - 1547496 | 28388.2 |
| abc transporter permease | LK406_06455 | Q1RGU3 | Negative | 1547493 - 1548236 | 26806.9 |
| duf4834 family protein | LK406_06460 | Not Available | Negative | 1548241 - 1548657 | 15743.3 |
| adenylosuccinate lyase | LK406_06465 | Q54J34 | Positive | 1548761 - 1550107 | 50333.4 |
| duf4988 domain-containing protein | LK406_06470 | Not Available | Negative | 1550177 - 1551820 | 58015.6 |
| tonb-dependent receptor | LK406_06475 | Not Available | Negative | 1552623 - 1554983 | 87287.5 |
| bile acid:sodium symporter family protein | LK406_06480 | Q93YR2 | Negative | 1555028 - 1555927 | 31584.1 |
| Trna-val | Not Available | Not Available | Positive | 1555968 - 1556045 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1556082 - 1556159 | Not Available |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
