Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5119 domain-containing protein | LK406_06345 | A7LXW1 | Positive | 1525278 - 1526228 | 34608.6 |
| fimbrillin family protein | LK406_06350 | Not Available | Positive | 1526327 - 1527361 | 36679.4 |
| fimbrillin family protein | LK406_06355 | Not Available | Positive | 1527563 - 1530319 | 97836.7 |
| galactose mutarotase | LK406_06360 | Q66HG4 | Negative | 1530843 - 1531973 | 41267.3 |
| beta-glucuronidase | LK406_06365 | P05804 | Negative | 1532006 - 1533883 | 70637.0 |
| nucleoid-associated protein | LK406_06370 | Not Available | Positive | 1534075 - 1535115 | 40184.8 |
| hypothetical protein | LK406_06375 | Not Available | Negative | 1535097 - 1535513 | 15009.8 |
| sdr family nad(p)-dependent oxidoreductase | LK406_06380 | P9WGR6 | Negative | 1535516 - 1536235 | 25234.7 |
| crp/fnr family transcriptional regulator | LK406_06385 | Not Available | Negative | 1536289 - 1536849 | 20780.9 |
| vtt domain-containing protein | LK406_06390 | P44005 | Positive | 1537002 - 1537460 | 16235.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
