Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | LK406_06295 | P06990 | Negative | 1513001 - 1513609 | 22275.9 |
| tyrosine-type recombinase/integrase | LK406_06300 | Q7ZAM5 | Negative | 1513611 - 1514594 | 37735.4 |
| restriction endonuclease subunit s | LK406_06305 | P06991 | Negative | 1514652 - 1515773 | 42493.9 |
| type i restriction-modification system subunit m | LK406_06310 | Q58617 | Negative | 1515775 - 1517307 | 57708.0 |
| type i restriction-modification system subunit m | LK406_06315 | Q57596 | Negative | 1517313 - 1518806 | 56306.3 |
| atp-binding protein | LK406_06320 | Q60260 | Negative | 1518843 - 1520216 | 52567.6 |
| helix-turn-helix domain-containing protein | LK406_06325 | Not Available | Negative | 1520336 - 1520656 | 11850.9 |
| hypothetical protein | LK406_06330 | Not Available | Positive | 1522099 - 1523004 | 34696.8 |
| hypothetical protein | LK406_06335 | Not Available | Positive | 1523111 - 1523764 | 25656.1 |
| duf3575 domain-containing protein | LK406_06340 | Not Available | Positive | 1524028 - 1525281 | 47301.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
