Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | LK406_06245 | Not Available | Positive | 1500580 - 1501649 | 39212.7 |
| duf1778 domain-containing protein | LK406_06250 | Not Available | Positive | 1501952 - 1502371 | 15605.8 |
| relaxase | LK406_06255 | Not Available | Positive | 1502368 - 1503576 | 46284.0 |
| hypothetical protein | LK406_06260 | Not Available | Positive | 1503581 - 1504120 | 20558.2 |
| virulence rhum family protein | LK406_06265 | Not Available | Negative | 1504192 - 1505214 | 39330.9 |
| dead/deah box helicase | LK406_06270 | P0DW40 | Negative | 1505287 - 1507797 | 95978.3 |
| duf1837 domain-containing protein | LK406_06275 | Not Available | Negative | 1507797 - 1508654 | 32945.2 |
| is110 family transposase | LK406_06280 | P20665 | Negative | 1508769 - 1509737 | 35660.5 |
| hsdr family type i site-specific deoxyribonuclease | LK406_06285 | Q60295 | Negative | 1510038 - 1512563 | 96395.6 |
| hypothetical protein | LK406_06290 | Not Available | Negative | 1512600 - 1512968 | 14050.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
