Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent metalloprotease | LK406_06045 | Not Available | Positive | 1447268 - 1449898 | 100612.0 |
| susc/raga family tonb-linked outer membrane protein | LK406_06050 | T2KPJ3 | Positive | 1449974 - 1453354 | 126802.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_06055 | T2KN63 | Positive | 1453369 - 1454799 | 54251.2 |
| duf4843 domain-containing protein | LK406_06060 | Not Available | Positive | 1454827 - 1455516 | 25997.6 |
| hypothetical protein | LK406_06065 | Not Available | Positive | 1455536 - 1457131 | 60762.4 |
| serine acetyltransferase | LK406_06070 | Q59967 | Negative | 1457253 - 1458122 | 30894.0 |
| cysteine synthase a | LK406_06075 | O32978 | Negative | 1458119 - 1459078 | 33552.6 |
| glutamate synthase large subunit | LK406_06080 | P55037 | Negative | 1459358 - 1463833 | 162729.0 |
| p-ii family nitrogen regulator | LK406_06085 | P11671 | Positive | 1464164 - 1464547 | 14863.8 |
| ammonium transporter | LK406_06090 | P54147 | Positive | 1464581 - 1465828 | 43638.3 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
