Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1435193 - 1435266 | Not Available |
| efflux rnd transporter periplasmic adaptor subunit | LK406_06000 | Q7N3E3 | Positive | 1435538 - 1436617 | 38950.1 |
| efflux rnd transporter permease subunit | LK406_06005 | Q57124 | Positive | 1436630 - 1439671 | 112576.0 |
| tolc family protein | LK406_06010 | Q9K2Y1 | Positive | 1439668 - 1441011 | 50488.0 |
| thioredoxin | LK406_06015 | O51088 | Positive | 1441420 - 1441869 | 16537.2 |
| 4fe-4s binding protein | LK406_06020 | H6LC27 | Positive | 1441869 - 1442063 | 6955.65 |
| marr family transcriptional regulator | LK406_06025 | P42193 | Positive | 1442056 - 1442409 | 13279.4 |
| fcd domain-containing protein | LK406_06030 | O07007 | Negative | 1442494 - 1443198 | 27196.7 |
| fecr domain-containing protein | LK406_06035 | P23485 | Positive | 1443328 - 1444518 | 43580.4 |
| zinc-dependent metalloprotease | LK406_06040 | Not Available | Positive | 1444542 - 1447241 | 102296.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
