Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4301 family protein | LK406_05945 | Not Available | Negative | 1424985 - 1426418 | 52332.3 |
| udp-n-acetylmuramate dehydrogenase | LK406_05950 | Q7NXN4 | Positive | 1426474 - 1427481 | 36498.8 |
| trna lysidine(34) synthetase tils | LK406_05955 | Q8A7D1 | Positive | 1427488 - 1428831 | 50904.0 |
| dna polymerase iii subunit delta | LK406_05960 | P54459 | Positive | 1428835 - 1429905 | 39958.8 |
| aminotransferase class iv | LK406_05965 | Not Available | Positive | 1429902 - 1430615 | 25578.6 |
| hypothetical protein | LK406_05970 | Not Available | Positive | 1430670 - 1431263 | 22818.7 |
| pantetheine-phosphate adenylyltransferase | LK406_05975 | Q11RP5 | Positive | 1431530 - 1432000 | 17617.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | LK406_05980 | A6LDS1 | Positive | 1432116 - 1433156 | 36835.3 |
| ahpc/tsa family protein | LK406_05985 | Q73B22 | Positive | 1433160 - 1434218 | 38689.5 |
| crossover junction endodeoxyribonuclease ruvc | LK406_05990 | B2RJT7 | Positive | 1434321 - 1434911 | 21357.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
