Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylenetetrahydrofolate reductase | LK406_05895 | O67422 | Positive | 1412379 - 1413335 | 35911.2 |
| m20 family metallopeptidase | LK406_05900 | P37112 | Positive | 1413522 - 1414637 | 40585.7 |
| ribonuclease r | LK406_05905 | O32231 | Positive | 1414634 - 1416874 | 85181.5 |
| atpase | LK406_05910 | Q57674 | Negative | 1416946 - 1417410 | 15352.1 |
| v-type atp synthase subunit i | LK406_05915 | P43439 | Negative | 1417437 - 1419260 | 67284.8 |
| v-type atp synthase subunit d | LK406_05920 | O83443 | Negative | 1419269 - 1419877 | 23229.2 |
| v-type atp synthase subunit b | LK406_05925 | B2S1S7 | Negative | 1419884 - 1421206 | 48220.8 |
| v-type atp synthase subunit a | LK406_05930 | Q73M28 | Negative | 1421210 - 1422964 | 65222.0 |
| duf2764 domain-containing protein | LK406_05935 | Not Available | Negative | 1422981 - 1423814 | 30736.1 |
| hypothetical protein | LK406_05940 | Q73MX5 | Negative | 1423819 - 1424433 | 22115.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
