Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | LK406_05845 | Q8Y5V0 | Negative | 1396294 - 1397511 | 47113.9 |
| rna polymerase sigma factor rpod/siga | LK406_05850 | P52329 | Negative | 1397813 - 1398673 | 32683.0 |
| do family serine endopeptidase | LK406_05855 | A6VUA4 | Negative | 1398729 - 1400213 | 52943.3 |
| methionine adenosyltransferase | LK406_05860 | Q7MTQ0 | Negative | 1400388 - 1401692 | 48008.0 |
| transketolase | LK406_05865 | A0A0I9QGZ2 | Negative | 1402062 - 1404095 | 73532.8 |
| atp-dependent clp protease atp-binding subunit clpx | LK406_05870 | Q8A128 | Negative | 1404155 - 1405420 | 46932.0 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | LK406_05875 | Q7MX09 | Negative | 1405426 - 1406094 | 24370.3 |
| trigger factor | LK406_05880 | Q2SK37 | Negative | 1406366 - 1407691 | 50448.1 |
| glutaminyl-peptide cyclotransferase | LK406_05885 | Q84WV9 | Positive | 1407952 - 1408767 | 30094.7 |
| methionine synthase | LK406_05890 | Q8DCJ7 | Positive | 1408768 - 1412382 | 131570.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
