Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid recombination protein | LK406_05645 | P03857 | Negative | 1368489 - 1370033 | 59555.3 |
| duf6371 domain-containing protein | LK406_05650 | Not Available | Negative | 1370184 - 1371203 | 38938.8 |
| duf3987 domain-containing protein | LK406_05655 | P52124 | Negative | 1371196 - 1372707 | 57581.1 |
| dna-binding protein | LK406_05660 | Not Available | Negative | 1372700 - 1373029 | 12991.4 |
| hypothetical protein | LK406_05665 | Not Available | Negative | 1373258 - 1373929 | 24841.3 |
| tyrosine-type recombinase/integrase | LK406_05670 | Q9CKC2 | Negative | 1373989 - 1374816 | 31572.3 |
| hypothetical protein | LK406_05675 | Not Available | Negative | 1374842 - 1375351 | 19838.6 |
| duf2795 domain-containing protein | LK406_05680 | Not Available | Negative | 1375551 - 1375772 | 8725.77 |
| fructose-6-phosphate aldolase | LK406_05685 | B2RHK7 | Positive | 1376209 - 1376865 | 23559.5 |
| integration host factor subunit beta | LK406_05690 | P19436 | Negative | 1376933 - 1377211 | 10335.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
