Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_05595 | Not Available | Negative | 1356752 - 1356997 | 9150.04 |
| helix-turn-helix transcriptional regulator | LK406_05600 | Not Available | Positive | 1357086 - 1357292 | 7833.52 |
| dead/deah box helicase family protein | LK406_05605 | P08956 | Positive | 1357355 - 1360060 | 102830.0 |
| type i restriction-modification system subunit m | LK406_05610 | Q89Z59 | Positive | 1360064 - 1361479 | 53020.3 |
| duf262 domain-containing hnh endonuclease family protein | LK406_05615 | Not Available | Positive | 1361492 - 1363309 | 70525.6 |
| pddexk nuclease domain-containing protein | LK406_05620 | P45423 | Positive | 1363306 - 1364463 | 44861.3 |
| restriction endonuclease subunit s | LK406_05625 | P19704 | Positive | 1364469 - 1365869 | 52361.1 |
| tyrosine-type recombinase/integrase | LK406_05630 | Q5JHA3 | Negative | 1365900 - 1366703 | 31516.3 |
| restriction endonuclease subunit s | LK406_05635 | Q58615 | Positive | 1366710 - 1367237 | 19997.2 |
| restriction endonuclease subunit s | LK406_05640 | P10485 | Negative | 1367232 - 1368479 | 47213.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
