Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3876 domain-containing protein | LK406_05545 | Not Available | Positive | 1347189 - 1347548 | 13823.8 |
| hypothetical protein | LK406_05550 | Not Available | Positive | 1347538 - 1347972 | 16204.9 |
| hypothetical protein | LK406_05555 | Not Available | Positive | 1348255 - 1349151 | 34744.4 |
| duf4141 domain-containing protein | LK406_05560 | Not Available | Positive | 1349195 - 1349824 | 23762.6 |
| conjugative transposon protein traj | LK406_05565 | Not Available | Positive | 1349826 - 1350902 | 39864.9 |
| conjugative transposon protein trak | LK406_05570 | Not Available | Positive | 1350917 - 1351540 | 23849.7 |
| hypothetical protein | LK406_05575 | Not Available | Positive | 1351530 - 1351745 | 8567.94 |
| conjugative transposon protein tram | LK406_05580 | Not Available | Positive | 1351751 - 1352956 | 43562.0 |
| conjugative transposon protein tran | LK406_05585 | Not Available | Positive | 1352964 - 1353863 | 33171.2 |
| hypothetical protein | LK406_05590 | Q9HZ71 | Negative | 1354237 - 1356759 | 97083.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
