Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | LK406_05495 | O86365 | Positive | 1336755 - 1338733 | 74522.2 |
| relaxase/mobilization nuclease domain-containing protein | LK406_05500 | Not Available | Negative | 1339346 - 1340572 | 47128.6 |
| superoxide dismutase | LK406_05505 | Not Available | Negative | 1340557 - 1340976 | 16466.2 |
| para family protein | LK406_05510 | Q72H90 | Positive | 1341493 - 1342248 | 28609.0 |
| duf3408 domain-containing protein | LK406_05515 | Not Available | Positive | 1342251 - 1342721 | 17683.3 |
| duf3408 domain-containing protein | LK406_05520 | Not Available | Positive | 1342745 - 1343341 | 22257.6 |
| hypothetical protein | LK406_05525 | Not Available | Positive | 1343537 - 1343890 | 12167.2 |
| duf4134 domain-containing protein | LK406_05530 | Not Available | Positive | 1344033 - 1344329 | 10309.7 |
| duf4133 domain-containing protein | LK406_05535 | Not Available | Positive | 1344333 - 1344662 | 12272.4 |
| trag family conjugative transposon atpase | LK406_05540 | P18004 | Positive | 1344667 - 1347177 | 96161.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
