Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_05445 | Not Available | Positive | 1324191 - 1324973 | 27703.1 |
| fimbrillin family protein | LK406_05450 | A7UZ95 | Positive | 1325005 - 1326036 | 36124.2 |
| fimbrillin family protein | LK406_05455 | A7UZ95 | Positive | 1326157 - 1327884 | 63499.1 |
| fimbrillin family protein | LK406_05460 | A7M4E1 | Positive | 1327914 - 1329563 | 60023.5 |
| hypothetical protein | LK406_05465 | Not Available | Positive | 1329756 - 1330307 | 20694.3 |
| hypothetical protein | LK406_05470 | Not Available | Negative | 1330614 - 1332944 | 86985.2 |
| leucine-rich repeat domain-containing protein | LK406_05475 | Not Available | Negative | 1332949 - 1334667 | 63455.6 |
| superoxide dismutase | LK406_05480 | Not Available | Positive | 1334722 - 1335151 | 15937.6 |
| superoxide dismutase | LK406_05485 | Not Available | Positive | 1335198 - 1335518 | 11863.4 |
| hypothetical protein | LK406_05490 | Not Available | Positive | 1336079 - 1336495 | 16394.7 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
