Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | LK406_05395 | Q18DN4 | Negative | 1312150 - 1313847 | 58894.4 |
| fimbrillin family protein | LK406_05400 | Q18DN4 | Negative | 1313912 - 1315714 | 63187.4 |
| fimbrillin family protein | LK406_05405 | A7UZ95 | Negative | 1315749 - 1316636 | 31419.7 |
| hypothetical protein | LK406_05410 | Not Available | Negative | 1316657 - 1317544 | 31295.8 |
| duf3575 domain-containing protein | LK406_05415 | Not Available | Negative | 1317561 - 1318661 | 41567.4 |
| superoxide dismutase | LK406_05420 | O32071 | Negative | 1318897 - 1319664 | 29528.4 |
| wyl domain-containing protein | LK406_05425 | Not Available | Positive | 1319689 - 1320051 | 13957.7 |
| superoxide dismutase | LK406_05430 | Not Available | Positive | 1320376 - 1321503 | 41504.3 |
| helix-turn-helix domain-containing protein | LK406_05435 | O34901 | Positive | 1321681 - 1322808 | 43517.4 |
| duf3575 domain-containing protein | LK406_05440 | Not Available | Positive | 1323009 - 1324067 | 39849.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
