Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_05345 | Not Available | Positive | 1305724 - 1306167 | 16294.6 |
| trna (guanosine(46)-n7)-methyltransferase trmb | LK406_05350 | A0LXL4 | Positive | 1306177 - 1306926 | 29012.5 |
| uracil-dna glycosylase | LK406_05355 | A6L7T5 | Positive | 1306965 - 1307627 | 24608.4 |
| helix-turn-helix domain-containing protein | LK406_05360 | Not Available | Positive | 1307997 - 1308281 | 10768.2 |
| helix-turn-helix domain-containing protein | LK406_05365 | Not Available | Positive | 1308283 - 1308579 | 11478.9 |
| helix-turn-helix domain-containing protein | LK406_05370 | Q48585 | Positive | 1308652 - 1309164 | 19879.5 |
| is3 family transposase | LK406_05375 | P19769 | Positive | 1309201 - 1309950 | 29883.2 |
| hypothetical protein | LK406_05380 | Not Available | Negative | 1309987 - 1310376 | 15072.2 |
| duf2958 domain-containing protein | LK406_05385 | Not Available | Negative | 1310447 - 1310764 | 12459.9 |
| hypothetical protein | LK406_05390 | Not Available | Positive | 1311029 - 1312027 | 38420.1 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
