Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_05295 | Not Available | Negative | 1292614 - 1293573 | 34165.7 |
| nucleoside deaminase | LK406_05300 | Q99W51 | Negative | 1293671 - 1294117 | 16100.3 |
| aspartate--trna ligase | LK406_05305 | Q7MXM0 | Positive | 1294566 - 1296320 | 66654.0 |
| replication-associated recombination protein a | LK406_05310 | P39918 | Positive | 1296492 - 1297766 | 47205.6 |
| metallophosphatase family protein | LK406_05315 | O27802 | Positive | 1297768 - 1298262 | 18429.3 |
| atp-dependent clp protease atp-binding subunit | LK406_05320 | Q9FI56 | Positive | 1298656 - 1301109 | 91986.4 |
| peptidase | LK406_05325 | Not Available | Negative | 1301180 - 1301383 | 7219.84 |
| hypothetical protein | LK406_05330 | Not Available | Negative | 1301411 - 1302157 | 29026.9 |
| mate family efflux transporter | LK406_05335 | Q6LQ49 | Positive | 1302785 - 1304146 | 49586.8 |
| hypothetical protein | LK406_05340 | P37541 | Positive | 1304268 - 1305719 | 54044.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
