Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_05195 | Not Available | Negative | 1268723 - 1269010 | 10045.0 |
| class i sam-dependent methyltransferase | LK406_05200 | Q07ZR3 | Negative | 1269043 - 1269927 | 33816.1 |
| u32 family peptidase | LK406_05205 | P76104 | Negative | 1269927 - 1271744 | 66073.5 |
| serine--trna ligase | LK406_05210 | Q2S1G4 | Positive | 1271839 - 1273110 | 47546.1 |
| 4fe-4s binding protein | LK406_05215 | P14073 | Positive | 1273157 - 1273324 | 5565.63 |
| sugar o-acetyltransferase | LK406_05220 | P40892 | Positive | 1273400 - 1273981 | 21204.6 |
| giy-yig nuclease family protein | LK406_05225 | Q4L3E5 | Negative | 1274254 - 1274538 | 11033.5 |
| duf1343 domain-containing protein | LK406_05230 | P40407 | Negative | 1274613 - 1275767 | 41824.7 |
| peptide chain release factor 2 | LK406_05235 | A0KNK6 | Negative | 1275781 - 1276893 | 42382.1 |
| hypothetical protein | LK406_05240 | Not Available | Negative | 1276991 - 1277560 | 22134.5 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
