Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family protein | LK406_05145 | P94424 | Negative | 1258436 - 1259293 | 31571.5 |
| nucleoside permease | LK406_05150 | P45562 | Negative | 1259301 - 1260542 | 45327.3 |
| Trna-gln | Not Available | Not Available | Positive | 1260680 - 1260750 | Not Available |
| m3 family metallopeptidase | LK406_05160 | P27298 | Negative | 1260948 - 1263029 | 77772.3 |
| m3 family metallopeptidase | LK406_05165 | P24171 | Negative | 1263112 - 1265295 | 83529.0 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | LK406_05170 | P37995 | Positive | 1265375 - 1266106 | 27147.8 |
| chromate transporter | LK406_05175 | O05215 | Positive | 1266251 - 1266796 | 19507.7 |
| chromate transporter | LK406_05180 | O05215 | Positive | 1266793 - 1267365 | 20714.8 |
| duf4405 domain-containing protein | LK406_05185 | Not Available | Negative | 1267346 - 1267801 | 16471.3 |
| arac family transcriptional regulator | LK406_05190 | C6DJR5 | Negative | 1267872 - 1268726 | 31717.2 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
