Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | LK406_05095 | A6LEJ8 | Negative | 1242387 - 1244375 | 71673.6 |
| hypothetical protein | LK406_05100 | Not Available | Negative | 1244376 - 1244783 | 15565.5 |
| molecular chaperone dnaj | LK406_05105 | B2RLJ0 | Negative | 1245047 - 1246216 | 41091.9 |
| nucleotide exchange factor grpe | LK406_05110 | Q8A8C4 | Negative | 1246221 - 1246829 | 22056.8 |
| sam-dependent methyltransferase | LK406_05115 | Q87B70 | Negative | 1246914 - 1247627 | 26018.5 |
| alanine racemase | LK406_05120 | A5N376 | Negative | 1247627 - 1249996 | 86435.4 |
| endonuclease muts2 | LK406_05125 | A5D0W6 | Negative | 1250145 - 1252637 | 92548.0 |
| mlad family protein | LK406_05130 | P64605 | Negative | 1252785 - 1253792 | 36141.2 |
| n-acetylmuramoyl-l-alanine amidase | LK406_05135 | P50864 | Negative | 1253803 - 1254993 | 43384.2 |
| lps-assembly protein lptd | LK406_05140 | A0KAD4 | Positive | 1255134 - 1257989 | 107446.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
