Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | LK406_05045 | Not Available | Positive | 1232252 - 1233727 | 55259.8 |
| fpra family a-type flavoprotein | LK406_05050 | Q57KT3 | Positive | 1233855 - 1235048 | 44268.1 |
| udp-glucose/gdp-mannose dehydrogenase family protein | LK406_05055 | O86422 | Positive | 1235161 - 1236474 | 48107.3 |
| sodium ion-translocating decarboxylase subunit beta | LK406_05060 | O06923 | Negative | 1236527 - 1237744 | 42998.7 |
| hypothetical protein | LK406_05065 | Not Available | Negative | 1237731 - 1238081 | 13379.2 |
| hypothetical protein | LK406_05070 | Not Available | Negative | 1238225 - 1238605 | 13929.9 |
| multidrug effflux mfs transporter | LK406_05075 | P96709 | Positive | 1238814 - 1239992 | 41349.1 |
| yhch/yjgk/yial family protein | LK406_05080 | P37673 | Negative | 1240047 - 1240496 | 17217.8 |
| endonuclease/exonuclease/phosphatase family protein | LK406_05085 | Not Available | Negative | 1240599 - 1241741 | 43000.7 |
| rhomboid family intramembrane serine protease | LK406_05090 | P53259 | Negative | 1241745 - 1242347 | 22861.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
