Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4988 domain-containing protein | LK406_04995 | Not Available | Negative | 1222268 - 1222786 | 18781.1 |
| hypothetical protein | LK406_05000 | Not Available | Negative | 1223384 - 1223659 | 10586.7 |
| hypothetical protein | LK406_05005 | Not Available | Negative | 1223656 - 1224042 | 14904.7 |
| hypothetical protein | LK406_05010 | Not Available | Negative | 1224275 - 1224547 | 10321.5 |
| hypothetical protein | LK406_05015 | Not Available | Negative | 1224755 - 1225306 | 20974.9 |
| hypothetical protein | LK406_05020 | Not Available | Negative | 1225424 - 1225804 | 14168.2 |
| hypothetical protein | LK406_05025 | Not Available | Positive | 1226677 - 1227192 | 18999.9 |
| site-specific integrase | LK406_05030 | B5YFZ8 | Negative | 1227338 - 1228540 | 46320.9 |
| Trna-phe | Not Available | Not Available | Positive | 1228653 - 1228728 | Not Available |
| susc/raga family tonb-linked outer membrane protein | LK406_05040 | T2KM18 | Positive | 1229131 - 1232238 | 113307.0 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
