Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lud domain-containing protein | LK406_04945 | Q8ET91 | Negative | 1212445 - 1213809 | 50674.4 |
| (fe-s)-binding protein | LK406_04950 | Q9KBU2 | Negative | 1213806 - 1214546 | 27613.6 |
| hsp20/alpha crystallin family protein | LK406_04955 | Q4UKR8 | Negative | 1214692 - 1215129 | 16819.9 |
| gnat family n-acetyltransferase | LK406_04960 | P08457 | Positive | 1215325 - 1215849 | 19379.3 |
| hypothetical protein | LK406_04965 | Not Available | Negative | 1215960 - 1216352 | 14730.9 |
| duf1848 domain-containing protein | LK406_04970 | Not Available | Positive | 1216721 - 1217728 | 38374.8 |
| dna polymerase iv | LK406_04975 | Q64X95 | Negative | 1217734 - 1218795 | 39679.6 |
| Trna-phe | Not Available | Not Available | Positive | 1218969 - 1219044 | Not Available |
| hypothetical protein | LK406_04985 | Not Available | Negative | 1219956 - 1220462 | 19772.0 |
| leucine-rich repeat protein | LK406_04990 | Not Available | Negative | 1220455 - 1222293 | 66800.6 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
