Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase | LK406_04895 | P20692 | Positive | 1203619 - 1204461 | 30914.4 |
| yran family protein | LK406_04900 | B2RLS5 | Positive | 1204458 - 1204823 | 13657.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | LK406_04905 | P0AC77 | Positive | 1204947 - 1206173 | 47412.3 |
| histidine phosphatase family protein | LK406_04910 | Not Available | Negative | 1206231 - 1207529 | 47640.7 |
| l-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | LK406_04915 | Q5L9H9 | Negative | 1207532 - 1208818 | 45581.7 |
| nudix hydrolase | LK406_04920 | Q8KP10 | Positive | 1208922 - 1209503 | 22181.2 |
| nitroreductase family protein | LK406_04925 | Q58779 | Negative | 1209566 - 1210243 | 23829.6 |
| 4fe-4s binding protein | LK406_04930 | Not Available | Positive | 1210427 - 1211275 | 29483.7 |
| gnat family n-acetyltransferase | LK406_04935 | P09163 | Positive | 1211279 - 1211719 | 16480.8 |
| lud domain-containing protein | LK406_04940 | Q8ET90 | Negative | 1211716 - 1212297 | 20706.9 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
