Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trl-like family protein | LK406_04845 | O87326 | Negative | 1195262 - 1195564 | 10410.7 |
| peptide deformylase | LK406_04850 | A6L9R8 | Negative | 1195572 - 1196117 | 20904.0 |
| holliday junction resolvase ruvx | LK406_04855 | Q7MT06 | Negative | 1196114 - 1196527 | 15567.0 |
| glycine--trna ligase | LK406_04860 | Q8KAB1 | Negative | 1196529 - 1198073 | 59535.8 |
| duf4595 domain-containing protein | LK406_04865 | Not Available | Positive | 1198415 - 1199689 | 47654.4 |
| dna repair protein radc | LK406_04870 | A5FMW5 | Negative | 1199761 - 1200399 | 23346.2 |
| ribonuclease iii | LK406_04875 | Q8A2E8 | Negative | 1200380 - 1201156 | 29796.2 |
| beta-ketoacyl-acp synthase ii | LK406_04880 | O34340 | Negative | 1201193 - 1202440 | 44259.5 |
| acyl carrier protein | LK406_04885 | Q8A2E6 | Negative | 1202487 - 1202723 | 8691.28 |
| dipeptidase pepe | LK406_04890 | P58493 | Positive | 1202902 - 1203603 | 25796.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
