Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1186120 - 1186193 | Not Available |
| 30s ribosomal protein s16 | LK406_04800 | B2RH41 | Positive | 1186414 - 1186968 | 19539.2 |
| ribosome maturation factor rimm | LK406_04805 | A0M5T0 | Positive | 1187084 - 1187599 | 19171.5 |
| trna 2-thiouridine(34) synthase mnma | LK406_04810 | A0M3J2 | Positive | 1187601 - 1188803 | 44827.6 |
| sgnh/gdsl hydrolase family protein | LK406_04815 | Not Available | Positive | 1188820 - 1189893 | 40689.7 |
| helix-turn-helix transcriptional regulator | LK406_04820 | Not Available | Positive | 1190067 - 1190300 | 8821.81 |
| hypothetical protein | LK406_04825 | Not Available | Positive | 1190316 - 1191125 | 30709.6 |
| pyruvate, phosphate dikinase | LK406_04830 | P22983 | Positive | 1191293 - 1194022 | 99795.5 |
| porin family protein | LK406_04835 | Not Available | Positive | 1194205 - 1194672 | 16907.1 |
| hypothetical protein | LK406_04840 | Not Available | Negative | 1194745 - 1195269 | 19555.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
