Alistipes senegalensis JC50

Gram-negative

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes senegalensis JC50 is a Gram-negative bacterium characterized by the presence of flagella, which may contribute to its motility and ecological adaptability. This species is notable for having two replicons, indicating a complex genomic structure that may facilitate various cellular processes. The primary host identified for Alistipes senegalensis JC50 is Bos, commonly known as cattle. This association suggests that A. senegalensis may play a role in the microbiota of ruminants, potentially influencing their digestion and overall health. The genomic information for this bacterium is available through two specific accessions: CP102252.1 and CP085931.1. These accession numbers provide a resource for researchers interested in studying the genetic characteristics and potential applications of A. senegalensis, such as its metabolic capabilities or interactions within the bovine gut. Given its classification and known traits, Alistipes senegalensis JC50 may contribute to the complex microbial ecosystem in the gastrointestinal tract of its host. Understanding this relationship could provide insights into the role of such bacteria in digestion, nutrient absorption, and overall host health. Further research into its functions and interactions within the bovine microbiome could shed light on potential benefits or implications for cattle management and health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes senegalensis
StrainJC50

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes senegalensis JC50, Complete Genome

Gene Summary

Adenine Count

843355 bp

Thymine Count

833767 bp

Guanine Count

1170539 bp

Cytosine Count

1175536 bp

Genome Length

4023197 bp

Protein-coding Genes

3164 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-argNot AvailableNot AvailablePositive1186120 - 1186193Not Available
30s ribosomal protein s16LK406_04800B2RH41Positive1186414 - 118696819539.2
ribosome maturation factor rimmLK406_04805A0M5T0Positive1187084 - 118759919171.5
trna 2-thiouridine(34) synthase mnmaLK406_04810A0M3J2Positive1187601 - 118880344827.6
sgnh/gdsl hydrolase family proteinLK406_04815Not AvailablePositive1188820 - 118989340689.7
helix-turn-helix transcriptional regulatorLK406_04820Not AvailablePositive1190067 - 11903008821.81
hypothetical proteinLK406_04825Not AvailablePositive1190316 - 119112530709.6
pyruvate, phosphate dikinaseLK406_04830P22983Positive1191293 - 119402299795.5
porin family proteinLK406_04835Not AvailablePositive1194205 - 119467216907.1
hypothetical proteinLK406_04840Not AvailableNegative1194745 - 119526919555.4

Displaying genes 4221 – 4230 of 6471 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.