Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna helicase recq | LK406_04745 | P15043 | Negative | 1175984 - 1178176 | 82105.7 |
| lps export abc transporter atp-binding protein | LK406_04750 | P33982 | Positive | 1178287 - 1179081 | 29714.8 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | LK406_04755 | Q8THH3 | Positive | 1179084 - 1180328 | 44698.2 |
| chorismate synthase | LK406_04760 | C7PC56 | Positive | 1180341 - 1181318 | 34237.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | LK406_04765 | Q8A1D7 | Positive | 1181315 - 1182154 | 30936.0 |
| recx family transcriptional regulator | LK406_04770 | A8GA08 | Positive | 1182136 - 1182648 | 19298.4 |
| m23 family metallopeptidase | LK406_04775 | P44693 | Positive | 1182633 - 1184360 | 63895.8 |
| response regulator | LK406_04780 | P13792 | Positive | 1184418 - 1184798 | 14560.7 |
| hypothetical protein | LK406_04785 | Not Available | Positive | 1184938 - 1185720 | 30593.3 |
| hypothetical protein | LK406_04790 | Not Available | Negative | 1185728 - 1186018 | 11245.4 |
Pathways
1231 pathways
Health Effects
No health effects information available for this bacterium.
